2024 SMBE Regional Meeting in Taiwan: Evolutionary Genomics & Bioinformatics
Program
Day 1
Plenary lecture 1 Molecular phylogenetics informs evolutionary biology and genomic medicine Dr. Sudhir Kumar (Temple University) Session 1 - Evolutionary biology through a functional genomics lens The evolution of umami and sweet taste receptors in vertebrates Dr. Yasuka Toda (Meiji University, JP) The genetic hotspot of Drosophila body color divergence and its implication in local adaptation Dr. Shu-Dan Yeh (National Central University) Exploring the direction and constraints of morphological evolution through generative AI Dr. Sheng-Feng Shen (Academia Sinica, TW) O1: Unraveling the biogeography insights of Saccharomyces cerevisiae Mr. Yu-Chen Yeh (National Taiwan University) O2: A long-standing T2R subtype in elasmobranchs: revisiting the origin of vertebrate bitter taste receptors Dr. Akihiro Itoigawa (Meji University, JP) Welcome reception @ GARDEN CAFETERIA, Howard Civil Service International House (福華國際文教會館恬園餐廳)March 28, 2024 (Thursday) Time Event Moderator 12:00 - 17:30 Registration 14:00 - 14:20 Opening remarks 14:20 - 15:10 Dr. Wen-Hsiung Li (Academia Sinica) 15:10 - 15:30 Break 15:30 - 17:20
Dr. Ben-Yang Liao
(National Health Research Institutes, TW)17:50 - 20:00
Day 2
Plenary lecture 2 Nile grass rat (Arvicanthis niloticus) as a model for studying phenotypic evolution linked to diurnal behavior Dr. Ben-Yang Liao (National Health Research Institutes, TW) Session 2 - Regulatory Evolution Accelerated cell type evolution in the human brain Dr. Soojin Yi (University of California, Santa Barbara) Distinguishing between intragenic trans-spliced and circular RNA by long-read sequencing Dr. Trees-Juen Chuang (Academia Sinica, TW) Unraveling the design principles of bacterial promoters and transcriptional regulation Dr. Hsin-Hung David Chou (National Taiwan University, TW) O3: Spatial radial distribution of centromeres, repetitive DNA, and breaks of synteny observed in gibbon-human chromosomes within the nucleus Dr. Hideyuki Tanabe (The Graduate University for Advanced Studies, SOKENDAI) O4: Spatial transcriptome with MAS-IsoSeq: a-MAIZE-zing resolution for leaf embryogenesis Dr. Kong Wye Lup (Academia Sinica, TW) Dr. Chau-Ti Ting (National Taiwan University) Plenary lecture 3 Genomic analyses in non-model systems shed new light on convergent floral evolution Dr. Tanja Slotte (Stockholm University, Sweden) Session 3 - Evolution of human commensal organisms Inference of population history and selective force on house mouse genomes during secondary contact in East Asia Dr. Naoki Osada (Hokkaido University, JP) Genetic spatial structure and competitive advantage of weedy rice: insights from transplanting rice agroecosystems Dr. Dong-Hong Wu (Taiwan Agricultural Research Institute) The genetic structure and ecology of Phellinus noxius, a hypervariable pathogen causing brown root rot disease of trees Dr. Chia-Lin Chung (National Taiwan University) O5: Denisovan DNA in present-day and ancient modern humans Dr. Yoko Satta (The Graduate University for Advanced Studies, SOKENDAI) O6: Inferring the evolutionary dynamics of Mycobacterium tuberculosis in Taiwan through molecular epidemiology Mr. Rou-Ya Bai (National Tsing Hua University)March 29, 2024 (Friday) Time Event Moderator 8:30 - 17:00 Registration 9:00 - 9:50 Dr. Yoko Satta (The Graduate University for Advanced Studies, SOKENDAI) 9:50 - 10:20 Break 10:20 - 12:10
12:10 - 13:20 Lunch 13:20 - 14:10 Dr. Hsuan-Chen Huang (National Yang Ming Chia Tung University) 14:10 - 15: 10 Poster session (Odd number) 15:10 - 17: 00 Dr. Cheng-Ruei Lee
(National Taiwan University, TW)17:30-19:30 Conference dinner (Invitation only)
Day 3
Plenary lecture 4 Statistical genetics elucidates disease biology, drug discovery, and personalized medicine Dr. Yukinori Okada (Osaka University, JP) Session 4 - Evolution in action Distinguishing mutants that resist drugs via different mechanisms by examining fitness tradeoffs Dr. Kerry Geiler-Samerotte (Arizon State University) Mutation bias as an evolutionary engine Dr. Deepa Agashe (National Centre for Biological Sciences, India) Interplay between epigenetic and genetic evolution in bacteria Dr. Chris Marx (University of Idaho) O7: Inferring evolutionary history and admixed genetic ancestry in the Taiwanese Siraya people Dr. Wen-Ya Ko (National Yang Ming Chiao Tung University) O8: Is there any population differentiation at particular SNPs in the human CYP1A2 gene? Ms. Sayaka Chiku (The Graduate University for Advanced Studies, SOKENDAI) Plenary lecture 5 Insights into deuterostome evolution from comparative genomics and transcriptional regulation Dr. Yi-Hsien Su (Academia Sinica) Session 5 - Evolutionary dynamics of pathogen populations Spatial drivers of disease progression in bacteria and viruses Dr. Alison Feder (University of Washington) Multi-level modularity in the molecular evolution of a bacterial species complex Dr. Chih-Horng Kuo (Academia Sinica, TW) Genomic surveillance of emerging viral pathogens: lessons from the past outbreaks Dr. Tsan Yuk Tommy Lam (The University of Hong Kong, HK) Dr. Hsiao-Han Chang (National Tsing Hua University, TW)March 30, 2024 (Saturday) Time Event Moderator 9:00 - 9:50 Dr. Hsueh-Fen Juan (National Taiwan University) 9:50 - 10:20 Break 10:20 - 12:10 Dr. Hsin-Hung David Chou
(National Taiwan University, TW)12:10 - 13:20 Lunch 13:20 - 14:10 Dr. Isheng Jason Tsai (Academia Sinica) 14:10 - 15:10 Poster session(Even number) 15:10 - 16:30 16:30 - 17:00 Closing remarks